Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC8.9□□□□□ -0.98
PrkdcP97313 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC8.9□□□□□ -0.98
PrkdcP97313 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC8.9□□□□□ -0.98
PrkdcP97313 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC8.9□□□□□ -0.98
PrkdcP97313 Gm807-202ENSMUST00000224929 408 ntBASIC8.9□□□□□ -0.98
PrkdcP97313 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PrkdcP97313 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
PrkdcP97313 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
PrkdcP97313 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC8.9□□□□□ -0.99
PrkdcP97313 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC8.9□□□□□ -0.99
PrkdcP97313 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PrkdcP97313 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PrkdcP97313 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
PrkdcP97313 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PrkdcP97313 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PrkdcP97313 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PrkdcP97313 Gm1848-201ENSMUST00000120711 789 ntBASIC8.9□□□□□ -0.99
PrkdcP97313 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.9□□□□□ -0.99
PrkdcP97313 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC8.9□□□□□ -0.99
PrkdcP97313 Gm18159-201ENSMUST00000174516 1070 ntBASIC8.9□□□□□ -0.99
PrkdcP97313 Gm28071-201ENSMUST00000190355 478 ntBASIC8.9□□□□□ -0.99
PrkdcP97313 Gm37852-201ENSMUST00000193027 350 ntBASIC8.9□□□□□ -0.99
PrkdcP97313 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC8.9□□□□□ -0.99
PrkdcP97313 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC8.9□□□□□ -0.99
PrkdcP97313 CT030653.1-201ENSMUST00000224382 1279 ntBASIC8.9□□□□□ -0.99
PrkdcP97313 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm13182-201ENSMUST00000122241 312 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Mir1956-201ENSMUST00000157748 65 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm44980-201ENSMUST00000205826 314 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 AC133602.1-201ENSMUST00000227510 509 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
PrkdcP97313 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
PrkdcP97313 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
PrkdcP97313 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC8.89□□□□□ -0.99
PrkdcP97313 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Mup-ps26-201ENSMUST00000121751 202 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC8.89□□□□□ -0.99
PrkdcP97313 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm42682-201ENSMUST00000198349 1265 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 AC123619.2-202ENSMUST00000225097 1568 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm6485-201ENSMUST00000160676 439 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm43692-201ENSMUST00000198236 1062 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 CT009713.8-202ENSMUST00000224732 385 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Gm44291-201ENSMUST00000203102 2865 ntBASIC8.89□□□□□ -0.99
PrkdcP97313 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PrkdcP97313 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC8.88□□□□□ -0.99
PrkdcP97313 Gm20414-201ENSMUST00000172918 646 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC8.88□□□□□ -0.99
PrkdcP97313 AC168279.1-201ENSMUST00000214611 382 ntBASIC8.88□□□□□ -0.99
PrkdcP97313 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
PrkdcP97313 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
PrkdcP97313 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms