Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.87□□□□□ -0.19
Trim43bP86448 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim43bP86448 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.87□□□□□ -0.19
Trim43bP86448 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43bP86448 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43bP86448 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim43bP86448 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43bP86448 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim43bP86448 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43bP86448 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim43bP86448 Gm46209-201ENSMUST00000217912 553 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim43bP86448 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43bP86448 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.86□□□□□ -0.19
Trim43bP86448 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43bP86448 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43bP86448 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trim43bP86448 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim43bP86448 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43bP86448 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 BC001981-202ENSMUST00000191393 1545 ntBASIC13.85□□□□□ -0.19
Trim43bP86448 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim43bP86448 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.85□□□□□ -0.19
Trim43bP86448 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43bP86448 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.85□□□□□ -0.19
Trim43bP86448 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.85□□□□□ -0.19
Trim43bP86448 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim43bP86448 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim43bP86448 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43bP86448 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim43bP86448 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim43bP86448 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms