Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.23□□□□□ -0.61
Pdlim4P70271 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.23□□□□□ -0.61
Pdlim4P70271 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.23□□□□□ -0.61
Pdlim4P70271 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Gm12859-201ENSMUST00000117834 427 ntBASIC11.22□□□□□ -0.61
Pdlim4P70271 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.22□□□□□ -0.61
Pdlim4P70271 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.22□□□□□ -0.61
Pdlim4P70271 Gm5279-201ENSMUST00000199575 745 ntBASIC11.22□□□□□ -0.61
Pdlim4P70271 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pdlim4P70271 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdlim4P70271 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.21□□□□□ -0.61
Pdlim4P70271 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Pdlim4P70271 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pdlim4P70271 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.21□□□□□ -0.61
Pdlim4P70271 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Gm18041-201ENSMUST00000218210 618 ntBASIC11.21□□□□□ -0.61
Pdlim4P70271 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.21□□□□□ -0.61
Pdlim4P70271 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdlim4P70271 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms