Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm13616-201ENSMUST00000120600 222 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm7775-201ENSMUST00000218871 853 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hmgb1P63158 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.84□□□□□ -0.03
Hmgb1P63158 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgb1P63158 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb1P63158 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb1P63158 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb1P63158 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb1P63158 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgb1P63158 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Hmgb1P63158 Gm4875-201ENSMUST00000118257 786 ntBASIC14.83□□□□□ -0.04
Hmgb1P63158 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.83□□□□□ -0.04
Hmgb1P63158 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.83□□□□□ -0.04
Hmgb1P63158 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Hmgb1P63158 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.83□□□□□ -0.04
Hmgb1P63158 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb1P63158 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.82□□□□□ -0.04
Hmgb1P63158 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.82□□□□□ -0.04
Hmgb1P63158 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.82□□□□□ -0.04
Hmgb1P63158 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Gm13223-201ENSMUST00000118609 747 ntBASIC14.82□□□□□ -0.04
Hmgb1P63158 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hmgb1P63158 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.82□□□□□ -0.04
Hmgb1P63158 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb1P63158 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmgb1P63158 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms