Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.84□□□□□ -0.67
Lmo4P61969 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lmo4P61969 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC10.84□□□□□ -0.67
Lmo4P61969 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lmo4P61969 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Lmo4P61969 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.83□□□□□ -0.68
Lmo4P61969 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm16479-201ENSMUST00000121706 932 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.83□□□□□ -0.68
Lmo4P61969 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm16379-201ENSMUST00000161469 348 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.83□□□□□ -0.68
Lmo4P61969 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Mir8109-201ENSMUST00000184375 117 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 Gm8762-201ENSMUST00000193486 339 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.83□□□□□ -0.68
Lmo4P61969 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lmo4P61969 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.83□□□□□ -0.68
Lmo4P61969 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lmo4P61969 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Lmo4P61969 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lmo4P61969 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lmo4P61969 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.82□□□□□ -0.68
Lmo4P61969 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.82□□□□□ -0.68
Lmo4P61969 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.82□□□□□ -0.68
Lmo4P61969 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.82□□□□□ -0.68
Lmo4P61969 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.82□□□□□ -0.68
Lmo4P61969 Gm6222-202ENSMUST00000182143 629 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 Gm27516-201ENSMUST00000184237 98 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.82□□□□□ -0.68
Lmo4P61969 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lmo4P61969 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lmo4P61969 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lmo4P61969 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lmo4P61969 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms