Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nup43P59235 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.71□□□□□ -0.37
Nup43P59235 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nup43P59235 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nup43P59235 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.71□□□□□ -0.37
Nup43P59235 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.71□□□□□ -0.37
Nup43P59235 Gm9908-201ENSMUST00000211534 448 ntBASIC12.71□□□□□ -0.37
Nup43P59235 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.71□□□□□ -0.37
Nup43P59235 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.71□□□□□ -0.37
Nup43P59235 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nup43P59235 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup43P59235 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup43P59235 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Nup43P59235 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Nup43P59235 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nup43P59235 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup43P59235 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nup43P59235 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
Nup43P59235 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup43P59235 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Nup43P59235 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nup43P59235 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.7□□□□□ -0.38
Nup43P59235 Gm15678-201ENSMUST00000117573 960 ntBASIC12.7□□□□□ -0.38
Nup43P59235 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Nup43P59235 Gm15429-201ENSMUST00000151268 798 ntBASIC12.7□□□□□ -0.38
Nup43P59235 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nup43P59235 Gm27701-201ENSMUST00000184498 110 ntBASIC12.7□□□□□ -0.38
Nup43P59235 Gm29608-201ENSMUST00000190444 463 ntBASIC12.7□□□□□ -0.38
Nup43P59235 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.7□□□□□ -0.38
Nup43P59235 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.7□□□□□ -0.38
Nup43P59235 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nup43P59235 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nup43P59235 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Nup43P59235 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup43P59235 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nup43P59235 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup43P59235 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Nup43P59235 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nup43P59235 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.69□□□□□ -0.38
Nup43P59235 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Gm11918-201ENSMUST00000121660 179 ntBASIC12.69□□□□□ -0.38
Nup43P59235 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup43P59235 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms