Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 Gm5161-201ENSMUST00000075243 853 ntBASIC15.98■□□□□ 0.15
Ercc3P49135 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Ercc3P49135 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.98■□□□□ 0.15
Ercc3P49135 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ercc3P49135 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ercc3P49135 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.98■□□□□ 0.15
Ercc3P49135 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.98■□□□□ 0.15
Ercc3P49135 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.98■□□□□ 0.15
Ercc3P49135 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ercc3P49135 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ercc3P49135 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ercc3P49135 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Ercc3P49135 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ercc3P49135 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.97■□□□□ 0.15
Ercc3P49135 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.97■□□□□ 0.15
Ercc3P49135 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ercc3P49135 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ercc3P49135 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Ercc3P49135 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Ercc3P49135 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ercc3P49135 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.96■□□□□ 0.15
Ercc3P49135 Gm15429-201ENSMUST00000151268 798 ntBASIC15.96■□□□□ 0.15
Ercc3P49135 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.96■□□□□ 0.15
Ercc3P49135 Gm2495-201ENSMUST00000191160 466 ntBASIC15.96■□□□□ 0.15
Ercc3P49135 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.96■□□□□ 0.15
Ercc3P49135 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.96■□□□□ 0.15
Ercc3P49135 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.96■□□□□ 0.15
Ercc3P49135 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.96■□□□□ 0.15
Ercc3P49135 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.96■□□□□ 0.15
Ercc3P49135 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.96■□□□□ 0.15
Ercc3P49135 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ercc3P49135 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Ercc3P49135 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Ercc3P49135 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Ercc3P49135 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ercc3P49135 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ercc3P49135 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ercc3P49135 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ercc3P49135 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.95■□□□□ 0.14
Ercc3P49135 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.95■□□□□ 0.14
Ercc3P49135 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Ercc3P49135 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.95■□□□□ 0.14
Ercc3P49135 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.95■□□□□ 0.14
Ercc3P49135 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
Ercc3P49135 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.95■□□□□ 0.14
Ercc3P49135 Gm24447-201ENSMUST00000083977 338 ntBASIC15.95■□□□□ 0.14
Ercc3P49135 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ercc3P49135 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc3P49135 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.94■□□□□ 0.14
Ercc3P49135 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc3P49135 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc3P49135 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ercc3P49135 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms