Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
GdnfP48540 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.82□□□□□ -0.52
GdnfP48540 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.82□□□□□ -0.52
GdnfP48540 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GdnfP48540 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
GdnfP48540 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
GdnfP48540 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Gm13616-201ENSMUST00000120600 222 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.81□□□□□ -0.52
GdnfP48540 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
GdnfP48540 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.81□□□□□ -0.52
GdnfP48540 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Gm9719-201ENSMUST00000162765 543 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.81□□□□□ -0.52
GdnfP48540 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.81□□□□□ -0.52
GdnfP48540 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GdnfP48540 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.81□□□□□ -0.52
GdnfP48540 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
GdnfP48540 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.8□□□□□ -0.52
GdnfP48540 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
GdnfP48540 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.8□□□□□ -0.52
GdnfP48540 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
GdnfP48540 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.8□□□□□ -0.52
GdnfP48540 Gm15693-201ENSMUST00000120470 637 ntBASIC11.8□□□□□ -0.52
GdnfP48540 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.8□□□□□ -0.52
GdnfP48540 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Gm28630-201ENSMUST00000187806 498 ntBASIC11.8□□□□□ -0.52
GdnfP48540 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.8□□□□□ -0.52
GdnfP48540 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
GdnfP48540 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.8□□□□□ -0.52
GdnfP48540 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.8□□□□□ -0.52
GdnfP48540 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
GdnfP48540 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
GdnfP48540 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms