Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 BC001981-202ENSMUST00000191393 1545 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.93□□□□□ -0.34
Prox1P48437 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.93□□□□□ -0.34
Prox1P48437 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.93□□□□□ -0.34
Prox1P48437 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prox1P48437 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.93□□□□□ -0.34
Prox1P48437 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Prox1P48437 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prox1P48437 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prox1P48437 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Prox1P48437 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prox1P48437 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prox1P48437 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prox1P48437 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.92□□□□□ -0.34
Prox1P48437 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.92□□□□□ -0.34
Prox1P48437 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.92□□□□□ -0.34
Prox1P48437 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.92□□□□□ -0.34
Prox1P48437 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.92□□□□□ -0.34
Prox1P48437 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prox1P48437 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prox1P48437 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Prox1P48437 Gm11745-201ENSMUST00000121669 448 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.91□□□□□ -0.34
Prox1P48437 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.91□□□□□ -0.34
Prox1P48437 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Gm18049-201ENSMUST00000208909 581 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Chchd1-203ENSMUST00000224633 557 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prox1P48437 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prox1P48437 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prox1P48437 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prox1P48437 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.91□□□□□ -0.34
Prox1P48437 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms