Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.94□□□□□ -0.18
HttP42859 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.94□□□□□ -0.18
HttP42859 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HttP42859 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HttP42859 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.93□□□□□ -0.18
HttP42859 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Gm8584-201ENSMUST00000171982 758 ntBASIC13.93□□□□□ -0.18
HttP42859 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.93□□□□□ -0.18
HttP42859 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.93□□□□□ -0.18
HttP42859 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HttP42859 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.93□□□□□ -0.18
HttP42859 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.93□□□□□ -0.18
HttP42859 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.93□□□□□ -0.18
HttP42859 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.93□□□□□ -0.18
HttP42859 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HttP42859 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.93□□□□□ -0.18
HttP42859 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HttP42859 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Gm12948-201ENSMUST00000119406 682 ntBASIC13.93□□□□□ -0.18
HttP42859 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HttP42859 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.93□□□□□ -0.18
HttP42859 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HttP42859 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HttP42859 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HttP42859 Gm12628-201ENSMUST00000122193 382 ntBASIC13.92□□□□□ -0.18
HttP42859 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.92□□□□□ -0.18
HttP42859 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.92□□□□□ -0.18
HttP42859 Gm15881-201ENSMUST00000148792 942 ntBASIC13.92□□□□□ -0.18
HttP42859 Gm10731-201ENSMUST00000181171 448 ntBASIC13.92□□□□□ -0.18
HttP42859 Gm27530-201ENSMUST00000184096 98 ntBASIC13.92□□□□□ -0.18
HttP42859 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HttP42859 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HttP42859 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
HttP42859 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.91□□□□□ -0.18
HttP42859 Gm4862-201ENSMUST00000170405 438 ntBASIC13.91□□□□□ -0.18
HttP42859 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Gm9111-201ENSMUST00000219394 709 ntBASIC13.91□□□□□ -0.18
HttP42859 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.91□□□□□ -0.18
HttP42859 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HttP42859 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HttP42859 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.91□□□□□ -0.18
HttP42859 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.91□□□□□ -0.18
HttP42859 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
HttP42859 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms