Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC19.74■□□□□ 0.75
Chd1P40201 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chd1P40201 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chd1P40201 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 AC158355.1-201ENSMUST00000215895 1705 ntBASIC19.74■□□□□ 0.75
Chd1P40201 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.74■□□□□ 0.75
Chd1P40201 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.74■□□□□ 0.75
Chd1P40201 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC19.73■□□□□ 0.75
Chd1P40201 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Chd1P40201 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC19.73■□□□□ 0.75
Chd1P40201 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC19.73■□□□□ 0.75
Chd1P40201 Gm28071-201ENSMUST00000190355 478 ntBASIC19.73■□□□□ 0.75
Chd1P40201 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC19.73■□□□□ 0.75
Chd1P40201 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 AC171241.1-201ENSMUST00000228144 1166 ntBASIC19.73■□□□□ 0.75
Chd1P40201 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chd1P40201 Snora73b-201ENSMUST00000083419 205 ntBASIC19.73■□□□□ 0.75
Chd1P40201 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chd1P40201 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chd1P40201 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chd1P40201 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC19.73■□□□□ 0.75
Chd1P40201 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC19.73■□□□□ 0.75
Chd1P40201 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC19.73■□□□□ 0.75
Chd1P40201 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chd1P40201 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1P40201 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chd1P40201 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd1P40201 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC19.72■□□□□ 0.75
Chd1P40201 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd1P40201 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chd1P40201 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.72■□□□□ 0.75
Chd1P40201 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.72■□□□□ 0.75
Chd1P40201 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1P40201 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chd1P40201 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Gm23153-201ENSMUST00000175323 313 ntBASIC19.71■□□□□ 0.75
Chd1P40201 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 AC154252.2-201ENSMUST00000223593 767 ntBASIC19.71■□□□□ 0.75
Chd1P40201 CT009713.8-202ENSMUST00000224732 385 ntBASIC19.71■□□□□ 0.75
Chd1P40201 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC19.71■□□□□ 0.75
Chd1P40201 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chd1P40201 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.71■□□□□ 0.75
Chd1P40201 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Gm14644-201ENSMUST00000116671 647 ntBASIC19.71■□□□□ 0.75
Chd1P40201 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Gm3793-201ENSMUST00000204973 672 ntBASIC19.71■□□□□ 0.75
Chd1P40201 Gm2517-201ENSMUST00000215651 348 ntBASIC19.71■□□□□ 0.75
Chd1P40201 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1P40201 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chd1P40201 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chd1P40201 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chd1P40201 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms