Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.54□□□□□ -0.24
Fen1P39749 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.54□□□□□ -0.24
Fen1P39749 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.54□□□□□ -0.24
Fen1P39749 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.54□□□□□ -0.24
Fen1P39749 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Fen1P39749 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Mir125a-201ENSMUST00000083545 68 ntBASIC13.54□□□□□ -0.24
Fen1P39749 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.54□□□□□ -0.24
Fen1P39749 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.54□□□□□ -0.24
Fen1P39749 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Fen1P39749 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Fen1P39749 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Mir1895-201ENSMUST00000122615 79 ntBASIC13.53□□□□□ -0.24
Fen1P39749 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.53□□□□□ -0.24
Fen1P39749 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.53□□□□□ -0.24
Fen1P39749 Gm37714-201ENSMUST00000194742 342 ntBASIC13.53□□□□□ -0.24
Fen1P39749 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.53□□□□□ -0.24
Fen1P39749 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.53□□□□□ -0.24
Fen1P39749 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Fen1P39749 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Fen1P39749 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.53□□□□□ -0.24
Fen1P39749 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.53□□□□□ -0.24
Fen1P39749 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
Fen1P39749 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fen1P39749 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.52□□□□□ -0.24
Fen1P39749 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fen1P39749 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Fen1P39749 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fen1P39749 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fen1P39749 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fen1P39749 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Fen1P39749 Gm11745-201ENSMUST00000121669 448 ntBASIC13.52□□□□□ -0.25
Fen1P39749 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.52□□□□□ -0.25
Fen1P39749 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fen1P39749 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms