Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.46□□□□□ -0.42
Cd40lgP27548 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.45□□□□□ -0.42
Cd40lgP27548 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gm13385-201ENSMUST00000121089 220 ntBASIC12.45□□□□□ -0.42
Cd40lgP27548 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.45□□□□□ -0.42
Cd40lgP27548 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd40lgP27548 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd40lgP27548 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Mir698-201ENSMUST00000102164 109 ntBASIC12.44□□□□□ -0.42
Cd40lgP27548 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd40lgP27548 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.44□□□□□ -0.42
Cd40lgP27548 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd40lgP27548 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.43□□□□□ -0.42
Cd40lgP27548 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gm27772-201ENSMUST00000184900 187 ntBASIC12.43□□□□□ -0.42
Cd40lgP27548 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms