Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.91□□□□□ -0.34
Cntn1P12960 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.91□□□□□ -0.34
Cntn1P12960 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Cntn1P12960 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cntn1P12960 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cntn1P12960 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cntn1P12960 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.91□□□□□ -0.34
Cntn1P12960 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.9□□□□□ -0.34
Cntn1P12960 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cntn1P12960 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Gm13612-201ENSMUST00000119276 390 ntBASIC12.9□□□□□ -0.34
Cntn1P12960 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.9□□□□□ -0.34
Cntn1P12960 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.9□□□□□ -0.34
Cntn1P12960 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.9□□□□□ -0.34
Cntn1P12960 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Cntn1P12960 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Cntn1P12960 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cntn1P12960 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.9□□□□□ -0.34
Cntn1P12960 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.9□□□□□ -0.34
Cntn1P12960 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.9□□□□□ -0.34
Cntn1P12960 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.9□□□□□ -0.34
Cntn1P12960 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.9□□□□□ -0.34
Cntn1P12960 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.9□□□□□ -0.34
Cntn1P12960 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cntn1P12960 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cntn1P12960 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Cntn1P12960 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Cntn1P12960 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.89□□□□□ -0.35
Cntn1P12960 Gm12390-201ENSMUST00000117897 397 ntBASIC12.89□□□□□ -0.35
Cntn1P12960 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Cntn1P12960 Gm11814-201ENSMUST00000119515 929 ntBASIC12.89□□□□□ -0.35
Cntn1P12960 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.89□□□□□ -0.35
Cntn1P12960 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.89□□□□□ -0.35
Cntn1P12960 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Gm38144-201ENSMUST00000192790 465 ntBASIC12.89□□□□□ -0.35
Cntn1P12960 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.89□□□□□ -0.35
Cntn1P12960 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Gm18473-201ENSMUST00000220543 868 ntBASIC12.89□□□□□ -0.35
Cntn1P12960 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms