Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
BckdkO55028 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
BckdkO55028 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.51□□□□□ -0.41
BckdkO55028 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BckdkO55028 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.51□□□□□ -0.41
BckdkO55028 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
BckdkO55028 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.5□□□□□ -0.41
BckdkO55028 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.5□□□□□ -0.41
BckdkO55028 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Gm37714-201ENSMUST00000194742 342 ntBASIC12.5□□□□□ -0.41
BckdkO55028 Gm17795-201ENSMUST00000214505 757 ntBASIC12.5□□□□□ -0.41
BckdkO55028 Gm18027-201ENSMUST00000218947 619 ntBASIC12.5□□□□□ -0.41
BckdkO55028 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.5□□□□□ -0.41
BckdkO55028 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.5□□□□□ -0.41
BckdkO55028 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
BckdkO55028 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
BckdkO55028 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.5□□□□□ -0.41
BckdkO55028 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BckdkO55028 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BckdkO55028 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.49□□□□□ -0.41
BckdkO55028 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.49□□□□□ -0.41
BckdkO55028 Gm14127-201ENSMUST00000117906 678 ntBASIC12.49□□□□□ -0.41
BckdkO55028 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Gm5279-201ENSMUST00000199575 745 ntBASIC12.49□□□□□ -0.41
BckdkO55028 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
BckdkO55028 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BckdkO55028 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms