Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Limk2O54785 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Limk2O54785 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.66□□□□□ -0.22
Limk2O54785 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.66□□□□□ -0.22
Limk2O54785 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.66□□□□□ -0.22
Limk2O54785 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.66□□□□□ -0.22
Limk2O54785 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.66□□□□□ -0.22
Limk2O54785 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Limk2O54785 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.66□□□□□ -0.22
Limk2O54785 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.66□□□□□ -0.22
Limk2O54785 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.66□□□□□ -0.22
Limk2O54785 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limk2O54785 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Limk2O54785 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Limk2O54785 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Matn2-206ENSMUST00000228570 2798 ntBASIC13.65□□□□□ -0.22
Limk2O54785 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Gm12957-201ENSMUST00000117835 377 ntBASIC13.65□□□□□ -0.22
Limk2O54785 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Limk2O54785 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.65□□□□□ -0.22
Limk2O54785 Gm27486-201ENSMUST00000184923 80 ntBASIC13.65□□□□□ -0.22
Limk2O54785 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.65□□□□□ -0.22
Limk2O54785 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Limk2O54785 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Limk2O54785 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.64□□□□□ -0.23
Limk2O54785 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Limk2O54785 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.64□□□□□ -0.23
Limk2O54785 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Limk2O54785 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.64□□□□□ -0.23
Limk2O54785 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.64□□□□□ -0.23
Limk2O54785 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.64□□□□□ -0.23
Limk2O54785 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.64□□□□□ -0.23
Limk2O54785 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Limk2O54785 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.64□□□□□ -0.23
Limk2O54785 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Limk2O54785 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limk2O54785 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms