Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Per1O35973 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.54□□□□□ -0.08
Per1O35973 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.54□□□□□ -0.08
Per1O35973 AY702102-202ENSMUST00000194651 1173 ntBASIC14.54□□□□□ -0.08
Per1O35973 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.54□□□□□ -0.08
Per1O35973 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Per1O35973 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Per1O35973 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.54□□□□□ -0.08
Per1O35973 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.54□□□□□ -0.08
Per1O35973 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.54□□□□□ -0.08
Per1O35973 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.54□□□□□ -0.08
Per1O35973 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.54□□□□□ -0.08
Per1O35973 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Per1O35973 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.54□□□□□ -0.08
Per1O35973 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Per1O35973 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.53□□□□□ -0.08
Per1O35973 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Mir874-201ENSMUST00000104769 76 ntBASIC14.53□□□□□ -0.08
Per1O35973 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.53□□□□□ -0.08
Per1O35973 Gm8805-201ENSMUST00000117848 313 ntBASIC14.53□□□□□ -0.08
Per1O35973 Gm11637-201ENSMUST00000120601 592 ntBASIC14.53□□□□□ -0.08
Per1O35973 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.53□□□□□ -0.08
Per1O35973 Gm2231-201ENSMUST00000125661 612 ntBASIC14.53□□□□□ -0.08
Per1O35973 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.53□□□□□ -0.08
Per1O35973 Gm27682-201ENSMUST00000183930 110 ntBASIC14.53□□□□□ -0.08
Per1O35973 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.53□□□□□ -0.08
Per1O35973 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.53□□□□□ -0.08
Per1O35973 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Per1O35973 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Per1O35973 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.53□□□□□ -0.08
Per1O35973 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Per1O35973 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Per1O35973 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Per1O35973 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Per1O35973 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Per1O35973 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Per1O35973 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Per1O35973 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
Per1O35973 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.52□□□□□ -0.09
Per1O35973 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.52□□□□□ -0.09
Per1O35973 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Per1O35973 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.52□□□□□ -0.09
Per1O35973 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.52□□□□□ -0.09
Per1O35973 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Per1O35973 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms