Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm8099-201ENSMUST00000200510 742 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm44262-201ENSMUST00000204969 372 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.62□□□□□ -0.39
Colca2F8VPY8 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gm8385-201ENSMUST00000058999 643 ntBASIC12.62□□□□□ -0.39
Colca2F8VPY8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm23200-201ENSMUST00000104379 132 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm12058-201ENSMUST00000118614 437 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm13492-201ENSMUST00000119772 665 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Colca2F8VPY8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.61□□□□□ -0.39
Colca2F8VPY8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Colca2F8VPY8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Colca2F8VPY8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Colca2F8VPY8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Colca2F8VPY8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Colca2F8VPY8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms