Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh9F8VPK8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh9F8VPK8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh9F8VPK8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh9F8VPK8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh9F8VPK8 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Mir874-201ENSMUST00000104769 76 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm9063-201ENSMUST00000223299 582 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh9F8VPK8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Gm7775-201ENSMUST00000218871 853 ntBASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh9F8VPK8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms