Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.05□□□□□ -0.48
Shank1D3YZU1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Gm4986-201ENSMUST00000119731 549 ntBASIC12.05□□□□□ -0.48
Shank1D3YZU1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.04□□□□□ -0.48
Shank1D3YZU1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.04□□□□□ -0.48
Shank1D3YZU1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.04□□□□□ -0.48
Shank1D3YZU1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.04□□□□□ -0.48
Shank1D3YZU1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shank1D3YZU1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gm27341-201ENSMUST00000183570 106 ntBASIC12.03□□□□□ -0.48
Shank1D3YZU1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.03□□□□□ -0.48
Shank1D3YZU1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.03□□□□□ -0.48
Shank1D3YZU1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms