Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm12403-201ENSMUST00000121384 959 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm25668-201ENSMUST00000157700 129 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.34□□□□□ -0.59
Col6a4A2AX52 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a4A2AX52 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Col6a4A2AX52 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.33□□□□□ -0.59
Col6a4A2AX52 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col6a4A2AX52 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.33□□□□□ -0.6
Col6a4A2AX52 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.33□□□□□ -0.6
Col6a4A2AX52 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.33□□□□□ -0.6
Col6a4A2AX52 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a4A2AX52 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm4986-201ENSMUST00000119731 549 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm25927-201ENSMUST00000175058 117 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm15782-201ENSMUST00000121073 445 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm24548-201ENSMUST00000158650 108 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a4A2AX52 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms