Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.96□□□□□ -0.18
Smarcb1Q9Z0H3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcb1Q9Z0H3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcb1Q9Z0H3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smarcb1Q9Z0H3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcb1Q9Z0H3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Gm27682-201ENSMUST00000183930 110 ntBASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms