Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm13226-201ENSMUST00000117838 404 ntBASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm7561-201ENSMUST00000211203 886 ntBASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm6091-201ENSMUST00000098307 165 ntBASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.8□□□□□ -0.36
Lhx9Q9WUH2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm12957-201ENSMUST00000117835 377 ntBASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm45784-201ENSMUST00000188360 142 ntBASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lhx9Q9WUH2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms