Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpsf3Q9QXK7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cpsf3Q9QXK7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm6152-201ENSMUST00000151704 340 ntBASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Itm2b-204ENSMUST00000228637 783 ntBASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf3Q9QXK7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Gm8602-201ENSMUST00000184045 607 ntBASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf3Q9QXK7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.46□□□□□ -0.1
Cpsf3Q9QXK7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Gm38671-201ENSMUST00000200573 130 ntBASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf3Q9QXK7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms