Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Mir125a-201ENSMUST00000083545 68 ntBASIC13.33□□□□□ -0.28
Lima1Q9ERG0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lima1Q9ERG0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Syt7-205ENSMUST00000224135 1557 ntBASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gm28630-201ENSMUST00000187806 498 ntBASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lima1Q9ERG0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lima1Q9ERG0 Gm29741-201ENSMUST00000192667 421 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms