Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Gm28760-201ENSMUST00000185995 736 ntBASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tubb3Q9ERD7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Gm21854-201ENSMUST00000179901 471 ntBASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Gm29741-201ENSMUST00000192667 421 ntBASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Gm9794-201ENSMUST00000202370 423 ntBASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb3Q9ERD7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.4□□□□□ -0.27
Tubb3Q9ERD7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Tubb3Q9ERD7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tubb3Q9ERD7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Gm14928-201ENSMUST00000120198 477 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms