Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.17□□□□□ -0.3
Rrp8Q9DB85 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Olfr284-202ENSMUST00000206647 966 ntBASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gm24526-201ENSMUST00000082921 158 ntBASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp8Q9DB85 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm14350-201ENSMUST00000116642 640 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm29396-201ENSMUST00000185659 716 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm38341-201ENSMUST00000195357 515 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm43758-201ENSMUST00000199500 367 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm10608-202ENSMUST00000213924 676 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp8Q9DB85 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.15□□□□□ -0.3
Rrp8Q9DB85 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp8Q9DB85 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp8Q9DB85 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp8Q9DB85 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms