Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Gm19220-201ENSMUST00000222682 803 ntBASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp4bQ9D8B3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Gm15678-201ENSMUST00000117573 960 ntBASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Gm26464-201ENSMUST00000157094 305 ntBASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp4bQ9D8B3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp4bQ9D8B3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.96■□□□□ 0.3
Chmp4bQ9D8B3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4bQ9D8B3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4bQ9D8B3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.96■□□□□ 0.3
Chmp4bQ9D8B3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp4bQ9D8B3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Chmp4bQ9D8B3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp4bQ9D8B3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms