Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps28Q9D1C8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Gm15806-201ENSMUST00000120696 955 ntBASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Gm24447-201ENSMUST00000083977 338 ntBASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps28Q9D1C8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Gm9002-201ENSMUST00000178437 499 ntBASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Gm38223-201ENSMUST00000194484 695 ntBASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vps28Q9D1C8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps28Q9D1C8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms