Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Gm18057-201ENSMUST00000208220 503 ntBASIC12.46□□□□□ -0.41
Trim13Q9CYB0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim13Q9CYB0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Trim13Q9CYB0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim13Q9CYB0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim13Q9CYB0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms