Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.87■□□□□ 0.13
Smc3Q9CW03 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.87■□□□□ 0.13
Smc3Q9CW03 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.87■□□□□ 0.13
Smc3Q9CW03 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm3436-201ENSMUST00000179930 840 ntBASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm27618-201ENSMUST00000183671 60 ntBASIC15.87■□□□□ 0.13
Smc3Q9CW03 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gm43703-201ENSMUST00000200523 763 ntBASIC15.87■□□□□ 0.13
Smc3Q9CW03 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Gm15770-201ENSMUST00000117498 584 ntBASIC15.86■□□□□ 0.13
Smc3Q9CW03 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.86■□□□□ 0.13
Smc3Q9CW03 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Gm6888-201ENSMUST00000221983 706 ntBASIC15.86■□□□□ 0.13
Smc3Q9CW03 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Smc3Q9CW03 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.85■□□□□ 0.13
Smc3Q9CW03 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.85■□□□□ 0.13
Smc3Q9CW03 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Gm26308-201ENSMUST00000157768 69 ntBASIC15.85■□□□□ 0.13
Smc3Q9CW03 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.85■□□□□ 0.13
Smc3Q9CW03 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.85■□□□□ 0.13
Smc3Q9CW03 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.85■□□□□ 0.13
Smc3Q9CW03 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.84■□□□□ 0.13
Smc3Q9CW03 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms