Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk9Q99J95 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdk9Q99J95 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.58□□□□□ -0.24
Cdk9Q99J95 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.58□□□□□ -0.24
Cdk9Q99J95 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.58□□□□□ -0.24
Cdk9Q99J95 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.58□□□□□ -0.24
Cdk9Q99J95 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdk9Q99J95 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.57□□□□□ -0.24
Cdk9Q99J95 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.57□□□□□ -0.24
Cdk9Q99J95 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.57□□□□□ -0.24
Cdk9Q99J95 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk9Q99J95 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm18737-201ENSMUST00000173594 937 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Gm44719-201ENSMUST00000206404 149 ntBASIC13.56□□□□□ -0.24
Cdk9Q99J95 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk9Q99J95 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms