Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Gm28911-201ENSMUST00000188837 117 ntBASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Gm9908-201ENSMUST00000211534 448 ntBASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Gm6745-201ENSMUST00000199216 526 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha9Q91Y11 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gm2495-201ENSMUST00000191160 466 ntBASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdha9Q91Y11 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdha9Q91Y11 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms