Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm28033-201ENSMUST00000184224 96 ntBASIC11.6□□□□□ -0.55
Tram1Q91V04 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.6□□□□□ -0.55
Tram1Q91V04 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Tram1Q91V04 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tram1Q91V04 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.6□□□□□ -0.55
Tram1Q91V04 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.6□□□□□ -0.55
Tram1Q91V04 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Tram1Q91V04 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tram1Q91V04 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm13823-201ENSMUST00000119930 345 ntBASIC11.59□□□□□ -0.55
Tram1Q91V04 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.59□□□□□ -0.55
Tram1Q91V04 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.59□□□□□ -0.55
Tram1Q91V04 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.59□□□□□ -0.55
Tram1Q91V04 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.59□□□□□ -0.55
Tram1Q91V04 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tram1Q91V04 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tram1Q91V04 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tram1Q91V04 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tram1Q91V04 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.58□□□□□ -0.55
Tram1Q91V04 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tram1Q91V04 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tram1Q91V04 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tram1Q91V04 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Mir5126-201ENSMUST00000175513 77 ntBASIC11.58□□□□□ -0.56
Tram1Q91V04 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.58□□□□□ -0.56
Tram1Q91V04 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.58□□□□□ -0.56
Tram1Q91V04 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tram1Q91V04 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tram1Q91V04 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms