Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb11Q91UZ8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gm13689-201ENSMUST00000119360 685 ntBASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb11Q91UZ8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm19087-201ENSMUST00000191430 946 ntBASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb11Q91UZ8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb11Q91UZ8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms