Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Odf4Q8VI88 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Odf4Q8VI88 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Odf4Q8VI88 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.12□□□□□ -0.47
Odf4Q8VI88 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Odf4Q8VI88 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Odf4Q8VI88 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Odf4Q8VI88 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.12□□□□□ -0.47
Odf4Q8VI88 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm12859-201ENSMUST00000117834 427 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm3436-201ENSMUST00000179930 840 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm24694-201ENSMUST00000180054 110 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm27663-201ENSMUST00000184839 110 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm29667-201ENSMUST00000190817 490 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Mir125a-201ENSMUST00000083545 68 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.11□□□□□ -0.47
Odf4Q8VI88 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.11□□□□□ -0.47
Odf4Q8VI88 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Gm15321-201ENSMUST00000121290 288 ntBASIC12.1□□□□□ -0.47
Odf4Q8VI88 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Gm43703-201ENSMUST00000200523 763 ntBASIC12.1□□□□□ -0.47
Odf4Q8VI88 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.1□□□□□ -0.47
Odf4Q8VI88 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Odf4Q8VI88 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.09□□□□□ -0.47
Odf4Q8VI88 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms