Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm23935-201ENSMUST00000102303 57 ntBASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm24270-201ENSMUST00000102326 57 ntBASIC13.96□□□□□ -0.17
Trim60Q8VI40 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm24245-201ENSMUST00000157318 57 ntBASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Gm27772-201ENSMUST00000184900 187 ntBASIC13.96□□□□□ -0.17
Trim60Q8VI40 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.96□□□□□ -0.17
Trim60Q8VI40 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim60Q8VI40 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.96□□□□□ -0.18
Trim60Q8VI40 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim60Q8VI40 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.95□□□□□ -0.18
Trim60Q8VI40 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.95□□□□□ -0.18
Trim60Q8VI40 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.95□□□□□ -0.18
Trim60Q8VI40 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm15678-201ENSMUST00000117573 960 ntBASIC13.95□□□□□ -0.18
Trim60Q8VI40 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.95□□□□□ -0.18
Trim60Q8VI40 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim60Q8VI40 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim60Q8VI40 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms