Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgcs1Q8JZK9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm4875-201ENSMUST00000118257 786 ntBASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm9063-201ENSMUST00000223299 582 ntBASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Hmgcs1Q8JZK9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgcs1Q8JZK9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgcs1Q8JZK9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hmgcs1Q8JZK9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.86□□□□□ -0.35
Hmgcs1Q8JZK9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgcs1Q8JZK9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgcs1Q8JZK9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgcs1Q8JZK9 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms