Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rftn2Q8CHX7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Gm12957-201ENSMUST00000117835 377 ntBASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Gm9899-201ENSMUST00000065519 555 ntBASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rftn2Q8CHX7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rftn2Q8CHX7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Gm13369-201ENSMUST00000119442 987 ntBASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Gm26927-201ENSMUST00000182385 965 ntBASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Gm37424-201ENSMUST00000191727 561 ntBASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.25□□□□□ -0.13
Rftn2Q8CHX7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms