Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.68■□□□□ 0.26
Smc5Q8CG46 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.68■□□□□ 0.26
Smc5Q8CG46 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.68■□□□□ 0.26
Smc5Q8CG46 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.67■□□□□ 0.26
Smc5Q8CG46 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smc5Q8CG46 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.66■□□□□ 0.26
Smc5Q8CG46 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Mir874-201ENSMUST00000104769 76 ntBASIC16.66■□□□□ 0.26
Smc5Q8CG46 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Gm27772-201ENSMUST00000184900 187 ntBASIC16.66■□□□□ 0.26
Smc5Q8CG46 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.66■□□□□ 0.26
Smc5Q8CG46 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.66■□□□□ 0.26
Smc5Q8CG46 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.66■□□□□ 0.26
Smc5Q8CG46 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc5Q8CG46 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.65■□□□□ 0.26
Smc5Q8CG46 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Gm6888-201ENSMUST00000221983 706 ntBASIC16.65■□□□□ 0.26
Smc5Q8CG46 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc5Q8CG46 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms