Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Gm13369-201ENSMUST00000119442 987 ntBASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm23931-201ENSMUST00000103842 109 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm14350-201ENSMUST00000116642 640 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm1335-201ENSMUST00000121653 386 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm27514-201ENSMUST00000183692 110 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm27572-201ENSMUST00000183702 255 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm37922-201ENSMUST00000195596 455 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.63□□□□□ -0.23
Sh3rf2Q8BZT2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm5187-201ENSMUST00000117317 991 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm11618-201ENSMUST00000117946 267 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm27682-201ENSMUST00000183930 110 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm45331-201ENSMUST00000209868 554 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.62□□□□□ -0.23
Sh3rf2Q8BZT2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf2Q8BZT2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms