Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Mir497b-201ENSMUST00000093601 125 ntBASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Gm27772-201ENSMUST00000184900 187 ntBASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Gm18905-201ENSMUST00000205454 928 ntBASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.71□□□□□ -0.37
Clrn3Q8BHH8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn3Q8BHH8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Gm14719-201ENSMUST00000121891 340 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Gm24694-201ENSMUST00000180054 110 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Gm27663-201ENSMUST00000184839 110 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Gm20445-201ENSMUST00000061905 565 ntBASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clrn3Q8BHH8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms