Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Samm50Q8BGH2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.82■□□□□ 0.12
Samm50Q8BGH2 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Samm50Q8BGH2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Gm21470-201ENSMUST00000187680 696 ntBASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.81■□□□□ 0.12
Samm50Q8BGH2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Samm50Q8BGH2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Gm6218-201ENSMUST00000219812 628 ntBASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Samm50Q8BGH2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms