Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Gm11779-201ENSMUST00000118541 368 ntBASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scaf4Q6PFF0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Mir874-201ENSMUST00000104769 76 ntBASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scaf4Q6PFF0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm24543-201ENSMUST00000103867 82 ntBASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm15467-201ENSMUST00000120582 445 ntBASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Mir1895-201ENSMUST00000122615 79 ntBASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm43125-201ENSMUST00000201724 730 ntBASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scaf4Q6PFF0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms