Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.35□□□□□ -0.11
CtifQ6PEE2 Gm10154-201ENSMUST00000084445 354 ntBASIC14.35□□□□□ -0.11
CtifQ6PEE2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CtifQ6PEE2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.35□□□□□ -0.11
CtifQ6PEE2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CtifQ6PEE2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CtifQ6PEE2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gm12895-201ENSMUST00000122214 226 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CtifQ6PEE2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.34□□□□□ -0.11
CtifQ6PEE2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CtifQ6PEE2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CtifQ6PEE2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CtifQ6PEE2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CtifQ6PEE2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CtifQ6PEE2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.33□□□□□ -0.12
CtifQ6PEE2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.33□□□□□ -0.12
CtifQ6PEE2 Gm11594-201ENSMUST00000122313 162 ntBASIC14.33□□□□□ -0.12
CtifQ6PEE2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Gm2651-201ENSMUST00000203560 838 ntBASIC14.33□□□□□ -0.12
CtifQ6PEE2 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.33□□□□□ -0.12
CtifQ6PEE2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtifQ6PEE2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtifQ6PEE2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms