Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcc2Q6PDG5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcc2Q6PDG5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smarcc2Q6PDG5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcc2Q6PDG5 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.74■□□□□ 0.11
Smarcc2Q6PDG5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcc2Q6PDG5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Gm15678-201ENSMUST00000117573 960 ntBASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Gm6745-201ENSMUST00000199216 526 ntBASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Gm6180-201ENSMUST00000065243 498 ntBASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcc2Q6PDG5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Gm5745-201ENSMUST00000183748 313 ntBASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcc2Q6PDG5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Gm12490-201ENSMUST00000120255 560 ntBASIC15.71■□□□□ 0.11
Smarcc2Q6PDG5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms