Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Krt42Q6IFX2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Gm15427-201ENSMUST00000117288 531 ntBASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Gm45453-201ENSMUST00000211758 853 ntBASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt42Q6IFX2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Mir8098-201ENSMUST00000184011 137 ntBASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gm27631-201ENSMUST00000184163 466 ntBASIC13.81□□□□□ -0.2
Krt42Q6IFX2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt42Q6IFX2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Gm2810-201ENSMUST00000118681 990 ntBASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Gm9103-201ENSMUST00000119371 405 ntBASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Krt42Q6IFX2 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms