Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.27□□□□□ -0.29
VclQ64727 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.27□□□□□ -0.29
VclQ64727 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.27□□□□□ -0.29
VclQ64727 Gm42550-201ENSMUST00000201553 960 ntBASIC13.27□□□□□ -0.29
VclQ64727 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.27□□□□□ -0.29
VclQ64727 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.27□□□□□ -0.29
VclQ64727 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.27□□□□□ -0.29
VclQ64727 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VclQ64727 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.27□□□□□ -0.29
VclQ64727 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VclQ64727 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VclQ64727 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.26□□□□□ -0.29
VclQ64727 Gm15429-201ENSMUST00000151268 798 ntBASIC13.26□□□□□ -0.29
VclQ64727 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VclQ64727 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VclQ64727 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.26□□□□□ -0.29
VclQ64727 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.26□□□□□ -0.29
VclQ64727 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VclQ64727 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VclQ64727 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.25□□□□□ -0.29
VclQ64727 Gm9002-201ENSMUST00000178437 499 ntBASIC13.25□□□□□ -0.29
VclQ64727 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VclQ64727 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Gm38144-201ENSMUST00000192790 465 ntBASIC13.25□□□□□ -0.29
VclQ64727 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.25□□□□□ -0.29
VclQ64727 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VclQ64727 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.25□□□□□ -0.29
VclQ64727 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VclQ64727 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
VclQ64727 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.24□□□□□ -0.29
VclQ64727 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.24□□□□□ -0.29
VclQ64727 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.24□□□□□ -0.29
VclQ64727 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VclQ64727 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VclQ64727 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VclQ64727 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VclQ64727 Gm15806-201ENSMUST00000120696 955 ntBASIC13.24□□□□□ -0.29
VclQ64727 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.24□□□□□ -0.29
VclQ64727 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms