Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.46□□□□□ -0.41
AtmQ62388 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.46□□□□□ -0.41
AtmQ62388 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
AtmQ62388 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
AtmQ62388 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AtmQ62388 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
AtmQ62388 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AtmQ62388 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
AtmQ62388 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AtmQ62388 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AtmQ62388 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AtmQ62388 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AtmQ62388 Gm10179-201ENSMUST00000086233 688 ntBASIC12.46□□□□□ -0.42
AtmQ62388 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
AtmQ62388 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.45□□□□□ -0.42
AtmQ62388 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.45□□□□□ -0.42
AtmQ62388 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.45□□□□□ -0.42
AtmQ62388 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
AtmQ62388 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.45□□□□□ -0.42
AtmQ62388 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.45□□□□□ -0.42
AtmQ62388 Gm18734-201ENSMUST00000172937 808 ntBASIC12.45□□□□□ -0.42
AtmQ62388 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.45□□□□□ -0.42
AtmQ62388 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AtmQ62388 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AtmQ62388 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AtmQ62388 Gm9062-201ENSMUST00000117712 727 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.44□□□□□ -0.42
AtmQ62388 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Gm9358-201ENSMUST00000183067 927 ntBASIC12.44□□□□□ -0.42
AtmQ62388 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.44□□□□□ -0.42
AtmQ62388 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
AtmQ62388 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
AtmQ62388 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AtmQ62388 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.44□□□□□ -0.42
AtmQ62388 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.44□□□□□ -0.42
AtmQ62388 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Gm6447-201ENSMUST00000118905 835 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Gm45433-201ENSMUST00000209386 247 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
AtmQ62388 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.44□□□□□ -0.42
AtmQ62388 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.44□□□□□ -0.42
AtmQ62388 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.44□□□□□ -0.42
AtmQ62388 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AtmQ62388 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AtmQ62388 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AtmQ62388 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AtmQ62388 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms