Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Foxc1Q61572 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Foxc1Q61572 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm7488-201ENSMUST00000117148 684 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm15487-201ENSMUST00000122373 465 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm28180-201ENSMUST00000189608 722 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm33320-201ENSMUST00000192232 530 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm37215-201ENSMUST00000194927 1259 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm6916-202ENSMUST00000205523 195 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm7775-201ENSMUST00000218871 853 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Foxc1Q61572 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Acot6-202ENSMUST00000222921 3622 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Foxc1Q61572 Syt7-204ENSMUST00000223586 1344 ntBASIC10.07□□□□□ -0.8
Foxc1Q61572 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Foxc1Q61572 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.06□□□□□ -0.8
Foxc1Q61572 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.06□□□□□ -0.8
Foxc1Q61572 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.06□□□□□ -0.8
Foxc1Q61572 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gm14719-201ENSMUST00000121891 340 ntBASIC10.06□□□□□ -0.8
Foxc1Q61572 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Foxc1Q61572 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.06□□□□□ -0.8
Foxc1Q61572 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms